Gene: GABRA6 ENSG00000145863

Description

gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Source:HGNC Symbol;Acc:4080]

Location

Chromosome 5: 160,974,069-161,129,599 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 9 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274545.5	GABRA6-001	2128	453aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4356	Q16445 Q71UU0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000523217.1	GABRA6-003	2393	443aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EV53 Q71UU0	NM_000811.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000520000.1	GABRA6-007	591	197aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000523691.1	GABRA6-009	573	191aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAS3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000517823.1	GABRA6-008	555	185aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBS7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000522269.1	GABRA6-005	584	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518888.1	GABRA6-006	565	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521520.1	GABRA6-002	2175	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524220.1	GABRA6-004	574	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

GABRA6 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q16445

CCDS

This gene is a member of the Human CCDS set: CCDS4356.1

Ensembl version

ENSG00000145863.6

Other assemblies

This gene maps to 161,547,063-161,702,593 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000130351 (version 3)

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Gene: GABRA6 ENSG00000145863

Summary