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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRPC1 ENSG00000144935

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Description

transient receptor potential cation channel, subfamily C, member 1 [Source:HGNC Symbol;Acc:12333]

Gene Synonyms

HTRP-1, TRP1

Location

Chromosome 3: 142,442,916-142,526,730 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000476941.1	TRPC1-002	3061	793aa	ENSP00000419313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58856	P48995	NM_001251845.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000273482.6	TRPC1-001	4324	759aa	ENSP00000273482.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3126	P48995	NM_003304.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000460401.1	TRPC1-004	397	65aa	ENSP00000418708.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480101.1	TRPC1-005	674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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