Gene: GALNT1 ENSG00000141429

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) [Source:HGNC Symbol;Acc:4123]

Gene Synonyms

GALNAC-T1, GalNAc-T1

Location

Chromosome 18: 33,161,081-33,291,798 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 7 transcripts (splice variants) and 16 paralogues.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269195.5	GALNT1-001	3847	559aa	ENSP00000269195.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11915	F5GY99 K7EJV8 Q10472	NM_020474.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537549.1	GALNT1-201	1770	499aa	ENSP00000440910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY99	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591081.1	GALNT1-002	1120	105aa	ENSP00000466411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q10472	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591924.1	GALNT1-006	542	105aa	ENSP00000465699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q10472	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589189.1	GALNT1-004	2346	387aa	ENSP00000465341.1	Nonsense mediated decay		K7EJV8	-	-
ENST00000590654.1	GALNT1-003	1770	50aa	ENSP00000465452.1	Nonsense mediated decay		K7EK46	-	-
ENST00000586725.1	GALNT1-005	272	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Gene: GALNT1 ENSG00000141429

Summary