Description
4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:23]
Gene Synonyms
GABA-AT, GABAT, NPD009
Location
Chromosome 16: 8,768,422-8,878,432 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 16 transcripts (splice variants) and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000396600.2 | ABAT-201 | 5586 | 500aa | ENSP00000379845.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10534 | H3BP74 H3BRJ1 P80404 | NM_000663.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000268251.8 | ABAT-001 | 4836 | 500aa | ENSP00000268251.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10534 | H3BP74 H3BRJ1 P80404 | NM_020686.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000567812.1 | ABAT-003 | 1959 | 515aa | ENSP00000456330.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BP74 H3BRJ1 H3BRN4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000425191.2 | ABAT-005 | 1923 | 500aa | ENSP00000411916.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10534 | H3BP74 H3BRJ1 P80404 | NM_001127448.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000569156.1 | ABAT-006 | 1911 | 515aa | ENSP00000454963.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BNQ7 H3BP74 H3BRJ1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000561870.1 | ABAT-013 | 592 | 65aa | ENSP00000456267.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BP74 H3BRJ1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000568847.1 | ABAT-009 | 580 | 31aa | ENSP00000455184.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BP74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565016.1 | ABAT-012 | 580 | 91aa | ENSP00000454415.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMJ9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564714.1 | ABAT-008 | 466 | 95aa | ENSP00000456392.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BP74 H3BRJ1 H3BRT1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566590.1 | ABAT-002 | 2423 | 53aa | ENSP00000455198.1 | Nonsense mediated decay | H3BP84 | - | - | |
| ENST00000562115.1 | ABAT-011 | 634 | 117aa | ENSP00000455502.1 | Nonsense mediated decay | H3BP74 H3BPW8 H3BRJ1 | - | - | |
| ENST00000563215.1 | ABAT-004 | 1548 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000565671.1 | ABAT-014 | 596 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000569695.1 | ABAT-010 | 470 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000563992.1 | ABAT-007 | 1870 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000564453.1 | ABAT-015 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
