Description
SEC11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17718]
Gene Synonyms
1810012E07Rik, SEC11L1, SPC18, SPCS4A, sid2895
Location
Chromosome 15: 85,212,775-85,259,947 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 10 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000268220.7 | SEC11A-001 | 1656 | 179aa | ENSP00000268220.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45340 | B4DUL4 H0YNX5 P67812 | NM_014300.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000455959.3 | SEC11A-002 | 1223 | 153aa | ENSP00000413121.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61742 | B4DUL4 H0YNX5 | NM_001271918.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000560266.1 | SEC11A-004 | 1089 | 164aa | ENSP00000452684.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61744 | H0YK72 H0YNX5 | NM_001271920.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000558134.1 | SEC11A-008 | 971 | 185aa | ENSP00000452697.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61743 | H0YK83 H0YNX5 | NM_001271922.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000558217.1 | SEC11A-009 | 882 | 135aa | ENSP00000453930.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNA5 | NM_001271919.1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000558196.1 | SEC11A-003 | 540 | 106aa | ENSP00000454193.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNX5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559729.1 | SEC11A-010 | 451 | 129aa | ENSP00000452932.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YKT4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000560409.1 | SEC11A-005 | 819 | 163aa | ENSP00000453997.1 | Nonsense mediated decay | H0YNG3 H0YNX5 | - | - | |
| ENST00000558924.1 | SEC11A-006 | 3626 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000559376.1 | SEC11A-007 | 2204 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
