Description
integrin, beta 7 [Source:HGNC Symbol;Acc:6162]
Location
Chromosome 12: 53,585,102-53,601,091 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 15 transcripts (splice variants) and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000267082.5 | ITGB7-004 | 2867 | 798aa | ENSP00000267082.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8849 | B7Z506 F8VNX4 F8W186 H3BRM2 P26010 | NM_000889.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000422257.3 | ITGB7-005 | 2791 | 798aa | ENSP00000408741.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8849 | B7Z506 F8VNX4 F8W186 H3BRM2 P26010 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000338737.4 | ITGB7-201 | 2324 | 650aa | ENSP00000345501.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX4 F8W186 H3BRM2 P26010 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000550743.2 | ITGB7-013 | 2138 | 650aa | ENSP00000455374.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX4 F8W186 H3BRM2 P26010 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000551319.1 | ITGB7-014 | 729 | 117aa | ENSP00000456446.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000552972.1 | ITGB7-011 | 607 | 158aa | ENSP00000450366.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX4 F8W186 H3BRM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549086.2 | ITGB7-007 | 576 | 88aa | ENSP00000446703.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W186 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552935.1 | ITGB7-006 | 513 | 93aa | ENSP00000456305.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W186 H3BRM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542497.1 | ITGB7-002 | 1841 | 471aa | ENSP00000437375.1 | Nonsense mediated decay | F5H6T4 F8VNX4 F8W186 H3BRM2 | - | - | |
| ENST00000589179.1 | ITGB7-016 | 1707 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549462.1 | ITGB7-001 | 1526 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551887.2 | ITGB7-008 | 760 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548706.1 | ITGB7-009 | 651 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549196.1 | ITGB7-015 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548269.1 | ITGB7-012 | 486 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
