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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAP ENSG00000114650

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Description

SREBF chaperone [Source:HGNC Symbol;Acc:30634]

Gene Synonyms

KIAA0199

Location

Chromosome 3: 47,455,203-47,518,616 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 15 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265565.5	SCAP-001	4394	1279aa	ENSP00000265565.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2755	C9JQ35 D6RA39 Q12770	NM_012235.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000441517.2	SCAP-201	3634	1023aa	ENSP00000416847.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W921	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545718.1	SCAP-202	3422	886aa	ENSP00000438956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q12770	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000495603.2	SCAP-008	706	132aa	ENSP00000423419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416847.1	SCAP-007	683	136aa	ENSP00000408102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQ35 D6RA39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448217.1	SCAP-006	550	88aa	ENSP00000415195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000320017.6	SCAP-002	3430	165aa	ENSP00000324296.6	Nonsense mediated decay		F8W9W7	-	-
ENST00000416208.1	SCAP-012	1222	85aa	ENSP00000409183.1	Nonsense mediated decay		F8WDP3	-	-
ENST00000428413.1	SCAP-011	807	121aa	ENSP00000401819.1	Nonsense mediated decay		F8WEH8	-	-
ENST00000465628.1	SCAP-016	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468965.1	SCAP-015	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000420588.1	SCAP-010	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494938.1	SCAP-014	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487942.1	SCAP-013	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485967.1	SCAP-009	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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