Gene: PTPN23 ENSG00000076201

Description

protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:14406]

Gene Synonyms

DKFZP564F0923, HD-PTP, HDPTP, KIAA1471, PTP-TD14

Location

Chromosome 3: 47,422,501-47,454,931 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 7 transcripts (splice variants), 3 paralogues and is associated with 1 phenotype.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265562.4	PTPN23-001	5244	1636aa	ENSP00000265562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2754	B4DST5 Q9H3S7	NM_015466.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000431726.1	PTPN23-201	5119	1510aa	ENSP00000387825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DST5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456221.1	PTPN23-006	592	169aa	ENSP00000396328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JD91	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000602307.1	PTPN23-003	5119	64aa	ENSP00000473266.1	Nonsense mediated decay		R4GMM7	-	-
ENST00000477276.2	PTPN23-008	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495653.1	PTPN23-009	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462998.1	PTPN23-007	260	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: PTPN23 ENSG00000076201

Summary