Description
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) [Source:HGNC Symbol;Acc:4204]
Gene Synonyms
CCAT, CTRCT13, GCNT2C, GCNT5, IGNT, II, NACGT1, NAGCT1, ULG3, bA360O19.2, bA421M1.1
Location
Chromosome 6: 10,492,456-10,629,601 forward strand.
GRCh37:CM000668.1
About this gene
This gene has 17 transcripts (splice variants), 7 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000379597.3 | GCNT2-003 | 4525 | 402aa | ENSP00000368917.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34338 | Q08M29 Q8N0V5 Q8N7N7 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000316170.3 | GCNT2-001 | 4381 | 400aa | ENSP00000314844.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4512 | Q06430 | NM_001491.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000265012.4 | GCNT2-004 | 4214 | 402aa | ENSP00000265012.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4513 | Q8NFS9 | NM_145655.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000495262.1 | GCNT2-006 | 2214 | 402aa | ENSP00000419411.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34338 | Q08M29 Q8N0V5 Q8N7N7 | NM_145649.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000410107.1 | GCNT2-010 | 1255 | 116aa | ENSP00000386321.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZBL3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000397423.2 | GCNT2-002 | 3528 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489225.1 | GCNT2-009 | 932 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000459872.1 | GCNT2-016 | 779 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000485764.1 | GCNT2-017 | 608 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474518.1 | GCNT2-014 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498320.1 | GCNT2-011 | 547 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000475577.1 | GCNT2-012 | 547 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488742.1 | GCNT2-015 | 545 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489819.1 | GCNT2-013 | 409 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474983.1 | GCNT2-007 | 1933 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483204.1 | GCNT2-008 | 1615 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461400.1 | GCNT2-005 | 320 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
