Gene: PPARGC1A ENSG00000109819

Description

peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:HGNC Symbol;Acc:9237]

Gene Synonyms

LEM6, PGC-1(alpha), PGC-1v, PGC1, PGC1A, PPARGC1

Location

Chromosome 4: 23,756,664-23,905,712 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 15 transcripts (splice variants), 2 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264867.2	PPARGC1A-001	6318	798aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3429	G8DM16 Q9UBK2	NM_013261.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000507380.1	PPARGC1A-004	2385	99aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBF3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000506055.1	PPARGC1A-007	2627	271aa	Nonsense mediated decay		Q9UBK2	-	-
ENST00000513205.1	PPARGC1A-008	1432	301aa	Nonsense mediated decay		B7Z406	-	-
ENST00000509702.1	PPARGC1A-006	2704	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509642.1	PPARGC1A-005	1391	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508380.1	PPARGC1A-011	576	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512169.1	PPARGC1A-012	550	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514517.1	PPARGC1A-010	548	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515534.1	PPARGC1A-015	433	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503714.1	PPARGC1A-014	380	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507342.1	PPARGC1A-003	359	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514494.1	PPARGC1A-002	529	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505469.1	PPARGC1A-009	406	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514479.1	PPARGC1A-013	324	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

PPARGC1A (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q9UBK2

CCDS

This gene is a member of the Human CCDS set: CCDS3429.1

Ensembl version

ENSG00000109819.4

Other assemblies

This gene maps to 23,755,041-23,904,089 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000097747 (version 2)

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Gene: PPARGC1A ENSG00000109819

Summary