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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CLDN16 ENSG00000113946

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Description

claudin 16 [Source:HGNC Symbol;Acc:2037]

Gene Synonyms

HOMG3, PCLN1

Location

Chromosome 3: 190,040,330-190,129,932 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 3 transcripts (splice variants), 127 orthologues, 22 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264734.2	CLDN16-001	3273	305aa	ENSP00000264734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3296	Q9Y5I7	NM_006580.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456423.1	CLDN16-002	430	119aa	ENSP00000414136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0SDD8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468220.1	CLDN16-003	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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