Gene: CDH3 ENSG00000062038

Description

cadherin 3, type 1, P-cadherin (placental) [Source:HGNC Symbol;Acc:1762]

Gene Synonyms

CDHP, HJMD, PCAD

Location

Chromosome 16: 68,670,092-68,756,519 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 11 transcripts (splice variants), 13 paralogues and is associated with 6 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264012.4	CDH3-001	3702	829aa	ENSP00000264012.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10868	J3KTE9 P22223	NM_001793.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000429102.2	CDH3-002	3611	784aa	ENSP00000398485.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P22223	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581171.1	CDH3-201	2746	774aa	ENSP00000462948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTE9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000568292.1	CDH3-005	570	155aa	ENSP00000463364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569080.1	CDH3-010	291	81aa	ENSP00000463415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QL75	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000542274.1	CDH3-003	2746	48aa	ENSP00000464021.1	Nonsense mediated decay		J3QR34	-	-
ENST00000567674.1	CDH3-009	892	41aa	ENSP00000463267.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566808.2	CDH3-006	573	73aa	ENSP00000462111.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569036.2	CDH3-007	563	59aa	ENSP00000464058.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569117.1	CDH3-008	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565453.1	CDH3-004	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Gene: CDH3 ENSG00000062038

Summary