Gene: PTPN4 ENSG00000088179

Description

protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) [Source:HGNC Symbol;Acc:9656]

Gene Synonyms

MEG, PTPMEG, PTPMEG1

Location

Chromosome 2: 120,517,207-120,741,394 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 13 transcripts (splice variants) and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263708.2	PTPN4-001	10300	926aa	ENSP00000263708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2129	F5H1A0 J3KQP5 P29074 Q4ZG31 Q53Q76 Q53QV5 Q580X3	NM_002830.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544261.1	PTPN4-201	1964	559aa	ENSP00000445841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1A0 Q4ZG31	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000441089.1	PTPN4-008	671	219aa	ENSP00000394706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488279.2	PTPN4-012	662	161aa	ENSP00000438445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H020 J3KQP5 Q53Q76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431283.1	PTPN4-010	630	197aa	ENSP00000387457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QT41	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000420482.1	PTPN4-011	568	75aa	ENSP00000405763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQP5 Q53Q76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430976.1	PTPN4-002	4154	135aa	ENSP00000395603.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433888.1	PTPN4-005	954	121aa	ENSP00000411364.1	Nonsense mediated decay		J3QT89	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460162.1	PTPN4-009	623	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485247.1	PTPN4-004	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460289.1	PTPN4-003	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488896.1	PTPN4-006	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469511.1	PTPN4-007	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: PTPN4 ENSG00000088179

Summary