Gene: SYP ENSG00000102003

Description

synaptophysin [Source:HGNC Symbol;Acc:11506]

Gene Synonyms

MRXSYP

Location

Chromosome X: 49,044,269-49,056,718 reverse strand.

GRCh37:CM000685.1

View alleles of this gene on alternative sequences

About this gene

This gene has 9 transcripts (splice variants), 1 gene allele, 3 paralogues and is associated with 4 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263233.4	SYP-001	2486	313aa	ENSP00000263233.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14321	B7Z359 P08247	NM_003179.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000479808.1	SYP-004	1850	313aa	ENSP00000418169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14321	B7Z359 P08247	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538567.1	SYP-201	870	195aa	ENSP00000437456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z359	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000472598.1	SYP-002	761	203aa	ENSP00000418387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376303.2	SYP-003	858	40aa	ENSP00000365480.2	Nonsense mediated decay		G5E9A2	-	-
ENST00000469389.1	SYP-009	581	118aa	ENSP00000418987.1	Nonsense mediated decay		F2Z3E1	-	-
ENST00000466635.1	SYP-008	513	118aa	ENSP00000420774.1	Nonsense mediated decay		F2Z3E1	-	-
ENST00000494396.1	SYP-005	2062	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472737.1	SYP-007	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SYP ENSG00000102003

Summary