Description
solute carrier family 6 (neurotransmitter transporter), member 4 [Source:HGNC Symbol;Acc:11050]
Gene Synonyms
5-HTT, 5-HTTLPR, 5HTT, HTT, OCD1, SERT, SERT1, hSERT
Location
Chromosome 17: 28,521,337-28,563,020 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 5 transcripts (splice variants), 12 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000401766.2 | SLC6A4-002 | 6543 | 630aa | ENSP00000385822.2 | Protein coding | CCDS11256 | B3VRQ0 B3VRQ5 B3VRR0 B3VRR5 B3VRS0 B3VRS5 B3VRU0 B3VRU5 B3VRV0 B3VRV5 B3VRW0 J3KPR9 P31645 Q9NYN7 | - | Ensembl Canonical, GENCODE Basic, |
| ENST00000261707.3 | SLC6A4-201 | 4516 | 630aa | ENSP00000261707.3 | Protein coding | CCDS11256 | B3VRQ0 B3VRQ5 B3VRR0 B3VRR5 B3VRS0 B3VRS5 B3VRU0 B3VRU5 B3VRV0 B3VRV5 B3VRW0 J3KPR9 P31645 Q9NYN7 | NM_001045.5 | GENCODE Basic, |
| ENST00000394821.2 | SLC6A4-001 | 2160 | 618aa | ENSP00000378298.2 | Protein coding | B3VRQ0 B3VRQ5 B3VRR0 B3VRR5 B3VRS0 B3VRS5 B3VRU0 B3VRV0 B3VRV5 B3VRW0 J3KPR9 Q9NYN7 | - | CDS 3' incomplete, | |
| ENST00000579221.1 | SLC6A4-003 | 1069 | 72aa | ENSP00000463172.1 | Nonsense mediated decay | B3VRQ0 | - | CDS 5' incomplete, | |
| ENST00000578609.1 | SLC6A4-004 | 566 | No protein | - | Retained intron | - | - | - |
