Gene: GDE1 ENSG00000006007

Description

glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:29644]

Gene Synonyms

363E6.2, MIR16

Location

GRCh37:CM000678.1

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000353258.3	GDE1-001	2954	331aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10578	Q9NZC3	NM_016641.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569899.1	GDE1-004	1618	129aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNA5 H3BRL5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569773.1	GDE1-003	739	102aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564172.1	GDE1-002	2238	108aa	Nonsense mediated decay		H3BU22	-	-
ENST00000563645.1	GDE1-005	769	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

GDE1 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q9NZC3

CCDS

This gene is a member of the Human CCDS set: CCDS10578.1

Ensembl version

ENSG00000006007.7

Other assemblies

This gene maps to 19,501,693-19,522,145 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000131454 (version 4)

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