Gene: SRSF1 ENSG00000136450

Description

serine/arginine-rich splicing factor 1 [Source:HGNC Symbol;Acc:10780]

Gene Synonyms

ASF, MGC5228, SF2, SF2P33, SF2p33, SFRS1, SRp30a

Location

Chromosome 17: 56,080,721-56,084,707 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 9 transcripts (splice variants), 6 paralogues and is associated with 2 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258962.4	SRSF1-001	1513	248aa	ENSP00000258962.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11600	J3QQV5 Q07955	NM_006924.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000582730.2	SRSF1-003	3117	201aa	ENSP00000462215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58580	J3QQV5 Q07955 Q59FA2	NM_001078166.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000584773.1	SRSF1-002	1317	253aa	ENSP00000463042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTL2 J3QQV5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585096.1	SRSF1-006	568	73aa	ENSP00000462687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSW7 J3QQV5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581979.1	SRSF1-004	1720	201aa	ENSP00000463223.1	Nonsense mediated decay	CCDS58580	J3QQV5 Q07955 Q59FA2	-	-
ENST00000583741.1	SRSF1-005	1465	65aa	ENSP00000463917.1	Nonsense mediated decay		J3QQV5	-	-
ENST00000584668.1	SRSF1-008	758	143aa	ENSP00000462616.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581497.1	SRSF1-009	438	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578430.1	SRSF1-007	689	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SRSF1 ENSG00000136450

Summary