Description
adenomatous polyposis coli [Source:HGNC Symbol;Acc:583]
Gene Synonyms
BTPS2, DP2, DP2.5, DP3, GS, PPP1R46
Location
Chromosome 5: 112,043,195-112,181,936 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 13 transcripts (splice variants), 2 paralogues and is associated with 142 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000457016.1 | APC-201 | 11025 | 2843aa | ENSP00000413133.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4107 | A1YIQ7 A5HB94 A5HB95 A5HB96 A5HB97 B2ZRE1 D6RFL6 E9PFT7 P25054 Q4LE70 Q9HAW6 Q9P119 Q9UM98 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000257430.4 | APC-001 | 10701 | 2843aa | ENSP00000257430.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4107 | A1YIQ7 A5HB94 A5HB95 A5HB96 A5HB97 B2ZRE1 D6RFL6 E9PFT7 P25054 Q4LE70 Q9HAW6 Q9P119 Q9UM98 | NM_000038.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000508376.2 | APC-004 | 10619 | 2843aa | ENSP00000427089.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4107 | A1YIQ7 A5HB94 A5HB95 A5HB96 A5HB97 B2ZRE1 D6RFL6 E9PFT7 P25054 Q4LE70 Q9HAW6 Q9P119 Q9UM98 | NM_001127510.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000512211.2 | APC-005 | 4061 | 1304aa | ENSP00000423828.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A5HB96 A5HB97 D6RFL6 E9PFT7 Q9HAW6 Q9P119 Q9UM98 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507379.1 | APC-002 | 3602 | 1135aa | ENSP00000423224.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A5HB96 A5HB97 B7Z2B6 Q9HAW6 Q9P119 Q9UM98 | NM_001127511.2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504915.2 | APC-011 | 817 | 272aa | ENSP00000473355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9HAW6 Q9P119 R4GMU6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000509732.1 | APC-008 | 524 | 118aa | ENSP00000426541.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFL6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508624.1 | APC-003 | 7406 | 287aa | ENSP00000424265.1 | Nonsense mediated decay | D6RFL6 E7EMH9 Q9UM98 | - | - | |
| ENST00000505350.1 | APC-012 | 573 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000502371.1 | APC-007 | 2630 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505084.1 | APC-006 | 1212 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000514164.1 | APC-014 | 645 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000506342.1 | APC-009 | 489 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
