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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SORT1 ENSG00000134243

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Description

sortilin 1 [Source:HGNC Symbol;Acc:11186]

Gene Synonyms

Gp95, LDLCQ6, NT3

Location

Chromosome 1: 109,852,192-109,940,573 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 9 transcripts (splice variants), 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256637.6	SORT1-001	7028	831aa	ENSP00000256637.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS798	Q99523	NM_002959.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538502.1	SORT1-201	2656	694aa	ENSP00000438597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55618	Q99523	NM_001205228.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482236.1	SORT1-007	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493736.1	SORT1-008	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471996.1	SORT1-006	469	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485149.1	SORT1-002	442	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495777.1	SORT1-005	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483508.1	SORT1-004	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466471.1	SORT1-003	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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