Description
cell adhesion molecule L1-like [Source:HGNC Symbol;Acc:1939]
Gene Synonyms
CALL, FLJ44930, L1CAM2, MGC132578
Location
Chromosome 3: 238,279-451,090 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 15 transcripts (splice variants) and 17 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000256509.2 | CHL1-001 | 8013 | 1224aa | ENSP00000256509.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2556 | C9J905 C9JEY3 C9JH37 C9JW79 O00533 | NM_006614.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397491.2 | CHL1-002 | 5235 | 1208aa | ENSP00000380628.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58812 | C9J905 C9JEY3 C9JH37 C9JW79 O00533 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000445697.1 | CHL1-013 | 1104 | 358aa | ENSP00000395239.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000435603.1 | CHL1-008 | 723 | 181aa | ENSP00000397445.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J905 C9JEY3 C9JH37 C9JW79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449294.2 | CHL1-010 | 594 | 84aa | ENSP00000390440.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEY3 C9JH37 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000427688.1 | CHL1-006 | 572 | 65aa | ENSP00000403311.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEY3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000421198.1 | CHL1-007 | 543 | 96aa | ENSP00000413628.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEY3 C9JH37 C9JW79 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000453040.1 | CHL1-003 | 3960 | 93aa | ENSP00000413109.1 | Nonsense mediated decay | F8WEP4 | - | - | |
| ENST00000489224.1 | CHL1-004 | 2560 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470005.1 | CHL1-012 | 707 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481167.1 | CHL1-005 | 662 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470880.2 | CHL1-011 | 651 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000486881.1 | CHL1-009 | 555 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461289.1 | CHL1-014 | 460 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471332.1 | CHL1-015 | 399 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
