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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NCAN ENSG00000130287

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Description

neurocan [Source:HGNC Symbol;Acc:2465]

Gene Synonyms

CSPG3, NEUR

Location

Chromosome 19: 19,322,782-19,363,042 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 5 transcripts (splice variants), 289 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252575.6	NCAN-001	6387	1321aa	ENSP00000252575.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12397	F5H7X3 O14594 Q4LE67	NM_004386.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538881.1	NCAN-201	2580	772aa	ENSP00000442202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7X3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588231.1	NCAN-003	545	175aa	ENSP00000465599.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590187.2	NCAN-002	2361	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585410.1	NCAN-004	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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