Description
calnexin [Source:HGNC Symbol;Acc:1473]
Gene Synonyms
CNX, IP90, P90
Location
Chromosome 5: 179,105,629-179,157,926 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 21 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000247461.4 | CANX-001 | 4260 | 592aa | ENSP00000247461.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4447 | B4E2T8 D6RAQ8 D6RAU8 D6RB85 D6RDP7 D6RFL1 D6RFW4 D6RHJ3 P27824 | NM_001746.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000452673.2 | CANX-005 | 4207 | 592aa | ENSP00000391646.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4447 | B4E2T8 D6RAQ8 D6RAU8 D6RB85 D6RDP7 D6RFL1 D6RFW4 D6RHJ3 P27824 | NM_001024649.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000504734.1 | CANX-002 | 2232 | 592aa | ENSP00000424063.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4447 | B4E2T8 D6RAQ8 D6RAU8 D6RB85 D6RDP7 D6RFL1 D6RFW4 D6RHJ3 P27824 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000415618.2 | CANX-201 | 2222 | 627aa | ENSP00000394817.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DGP8 B4E2T8 D6RAQ8 D6RAU8 D6RB85 D6RDP7 D6RFL1 D6RFW4 D6RHJ3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000512607.2 | CANX-202 | 1876 | 484aa | ENSP00000423588.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2T8 D6RFL1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000502673.1 | CANX-003 | 1000 | 308aa | ENSP00000421107.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFL1 D6RFW4 D6RGY2 Q6ZP56 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000502296.1 | CANX-006 | 825 | 134aa | ENSP00000424745.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAQ8 D6RAU8 D6RFW4 D6RHJ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513246.1 | CANX-009 | 727 | 107aa | ENSP00000421813.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAQ8 D6RFW4 D6RHJ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506654.1 | CANX-017 | 592 | 131aa | ENSP00000426555.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFL1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514383.1 | CANX-021 | 585 | 144aa | ENSP00000424341.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAQ8 D6RAU8 D6RB85 D6RFW4 D6RHJ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507307.1 | CANX-008 | 582 | 78aa | ENSP00000426052.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFW4 D6RHJ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000502498.1 | CANX-007 | 570 | 168aa | ENSP00000425246.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAQ8 D6RAU8 D6RB85 D6RDP7 D6RFW4 D6RHJ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000509563.1 | CANX-010 | 569 | 32aa | ENSP00000421434.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFW4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508787.1 | CANX-014 | 568 | 189aa | ENSP00000424140.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000510810.1 | CANX-018 | 511 | 170aa | ENSP00000424740.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000514032.1 | CANX-004 | 1876 | 96aa | ENSP00000427115.1 | Nonsense mediated decay | D6RD16 D6RFW4 D6RHJ3 | - | - | |
| ENST00000504579.1 | CANX-020 | 533 | 61aa | ENSP00000426425.1 | Nonsense mediated decay | D6RFW4 D6RG29 | - | - | |
| ENST00000503126.1 | CANX-016 | 592 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503303.1 | CANX-011 | 345 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000506298.1 | CANX-015 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505090.1 | CANX-012 | 485 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
