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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KRT13 ENSG00000171401

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Description

keratin 13 [Source:HGNC Symbol;Acc:6415]

Gene Synonyms

CK13, K13, MGC161462, MGC3781

Location

Chromosome 17: 39,657,233-39,661,957 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 9 transcripts (splice variants), 25 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246635.3	KRT13-001	1699	458aa	ENSP00000246635.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11396	K7EMD9 K7ERE3 P13646	NM_153490.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000336861.3	KRT13-002	1673	420aa	ENSP00000336604.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11397	K7EMD9 K7ERE3 P13646	NM_002274.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000587544.1	KRT13-005	1456	415aa	ENSP00000468221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMD9 K7ERE3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590425.1	KRT13-007	572	165aa	ENSP00000466465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMD9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587435.1	KRT13-008	549	162aa	ENSP00000467833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464634.2	KRT13-006	1219	63aa	ENSP00000466525.1	Nonsense mediated decay		K7EMJ2	-	-
ENST00000587118.1	KRT13-009	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475217.1	KRT13-004	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468313.1	KRT13-003	1835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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