Gene: SLC22A5 ENSG00000197375

Description

solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:HGNC Symbol;Acc:10969]

Gene Synonyms

CDSP, OCTN2, OCTN2VT, SCD

Location

Chromosome 5: 131,705,444-131,731,306 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 9 transcripts (splice variants), 16 paralogues and is associated with 5 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245407.3	SLC22A5-001	3237	557aa	ENSP00000245407.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4154	O76082	NM_003060.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435065.2	SLC22A5-201	1746	581aa	ENSP00000402760.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZC0 O76082	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415928.1	SLC22A5-004	720	240aa	ENSP00000388838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZC0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000447841.1	SLC22A5-005	998	37aa	ENSP00000389284.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448810.1	SLC22A5-002	852	136aa	ENSP00000401860.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000437841.2	SLC22A5-008	850	141aa	ENSP00000400553.1	Nonsense mediated decay		F8WCC9	-	-
ENST00000479605.1	SLC22A5-007	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461013.1	SLC22A5-006	10435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475308.1	SLC22A5-003	3693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SLC22A5 ENSG00000197375

Summary