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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SNRPA ENSG00000077312

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Description

small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:11151]

Gene Synonyms

Mud1, U1-A, U1A

Location

Chromosome 19: 41,256,542-41,271,294 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 11 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243563.3	SNRPA-001	1621	282aa	ENSP00000243563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12565	M0QZG7 M0R221 M0R2B8 P09012	NM_004596.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000601393.1	SNRPA-006	969	256aa	ENSP00000472355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R268	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601545.1	SNRPA-003	695	184aa	ENSP00000470534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599362.1	SNRPA-009	555	142aa	ENSP00000472258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R221	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597353.1	SNRPA-011	538	148aa	ENSP00000472449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R221 M0R2B8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601253.1	SNRPA-008	519	128aa	ENSP00000469224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXK2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600456.1	SNRPA-005	592	87aa	ENSP00000471230.1	Nonsense mediated decay		M0R0G9	-	-
ENST00000599570.1	SNRPA-007	925	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000598923.1	SNRPA-010	952	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598452.1	SNRPA-004	679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596860.1	SNRPA-012	336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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