Description
sorting nexin 17 [Source:HGNC Symbol;Acc:14979]
Gene Synonyms
KIAA0064
Location
Chromosome 2: 27,593,389-27,599,995 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 12 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000233575.2 | SNX17-001 | 2044 | 470aa | ENSP00000233575.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1750 | B4DDM3 B4DLL7 B4DTB8 Q15036 | NM_014748.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542478.1 | SNX17-202 | 1844 | 256aa | ENSP00000442567.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDM3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000543024.1 | SNX17-203 | 1567 | 256aa | ENSP00000441779.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDM3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537606.1 | SNX17-201 | 1451 | 445aa | ENSP00000439208.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58704 | B4DDM3 B4DLL7 Q15036 | NM_001267060.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000427123.1 | SNX17-003 | 2007 | 87aa | ENSP00000405399.1 | Nonsense mediated decay | F8WAZ0 | - | - | |
| ENST00000440760.1 | SNX17-002 | 1955 | 53aa | ENSP00000399727.1 | Nonsense mediated decay | F8WFA0 | - | - | |
| ENST00000453453.1 | SNX17-005 | 1638 | 69aa | ENSP00000401922.1 | Nonsense mediated decay | F8WEG6 | - | - | |
| ENST00000494893.1 | SNX17-004 | 966 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489402.1 | SNX17-007 | 743 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493711.1 | SNX17-009 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484886.1 | SNX17-006 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464279.1 | SNX17-008 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
