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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPCS1 ENSG00000114902

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Description

signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23401]

Gene Synonyms

HSPC033, SPC1, SPC12, YJR010C-A

Location

Chromosome 3: 52,738,971-52,742,182 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233025.7	SPCS1-001	1274	169aa	ENSP00000233025.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33769	C9JBL1 Q9Y6A9	NM_014041.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000602728.1	SPCS1-006	832	102aa	ENSP00000473265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBL1 Q9Y6A9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423431.1	SPCS1-004	822	80aa	ENSP00000391610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBL1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000474945.1	SPCS1-003	981	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000448693.2	SPCS1-002	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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