Description
S-phase kinase-associated protein 1 [Source:HGNC Symbol;Acc:10899]
Gene Synonyms
EMC19, MGC34403, OCP-II, OCP2, SKP1A, TCEB1L, p19A
Location
Chromosome 5: 133,484,633-133,512,729 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 13 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000353411.6 | SKP1-001 | 9467 | 163aa | ENSP00000231487.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4171 | E5RGM3 E7ERH2 P63208 | NM_170679.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000522552.1 | SKP1-002 | 1683 | 160aa | ENSP00000429472.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4172 | E5RGM3 E7ERH2 P63208 | NM_006930.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000521216.1 | SKP1-009 | 899 | 163aa | ENSP00000431067.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJR5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000517625.1 | SKP1-004 | 876 | 163aa | ENSP00000429961.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4171 | E5RGM3 E7ERH2 P63208 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000522855.1 | SKP1-005 | 802 | 163aa | ENSP00000429686.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4171 | E5RGM3 E7ERH2 P63208 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000523359.1 | SKP1-007 | 748 | 18aa | ENSP00000428962.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000519321.1 | SKP1-003 | 692 | 142aa | ENSP00000429415.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGM3 E7ERH2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520417.1 | SKP1-006 | 610 | 102aa | ENSP00000429996.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGM3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000328392.6 | SKP1-008 | 572 | 158aa | ENSP00000331708.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGM3 E7ERH2 F8W8N3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523966.1 | SKP1-010 | 899 | 41aa | ENSP00000429995.1 | Nonsense mediated decay | E5RGM4 | - | - | |
| ENST00000519054.1 | SKP1-011 | 654 | 39aa | ENSP00000430885.1 | Nonsense mediated decay | E5RHM3 | - | - | |
| ENST00000517691.1 | SKP1-013 | 2033 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524288.1 | SKP1-012 | 732 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
