Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GLI1 ENSG00000111087

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Description

GLI family zinc finger 1 [Source:HGNC Symbol;Acc:4317]

Gene Synonyms

GLI

Location

Chromosome 12: 57,853,918-57,866,045 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 8 transcripts (splice variants), 14 paralogues and is associated with 69 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000228682.2	GLI1-001	3613	1106aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8940	B1Q2M2 E9PIB9 E9PQQ1 F5H6H8 P08151	NM_005269.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000546141.1	GLI1-202	3475	1065aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53806	E9PIB9 F5H6H8 P08151	NM_001167609.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543426.1	GLI1-201	3394	978aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53807	E9PIB9 F5H6H8	NM_001160045.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528467.1	GLI1-003	3196	1065aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIB9 F5H6H8 P08151	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532291.1	GLI1-004	784	175aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528432.1	GLI1-005	480	129aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1Q2M2 E9PQQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527742.1	GLI1-007	676	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530789.1	GLI1-006	314	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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