Description
paxillin [Source:HGNC Symbol;Acc:9718]
Location
Chromosome 12: 120,648,250-120,703,574 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 20 transcripts (splice variants) and 14 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000267257.7 | PXN-201 | 3815 | 605aa | ENSP00000267257.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58281 | F8W0G0 F8W0K8 F8W1E0 P49023 | NM_001243756.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397506.3 | PXN-202 | 4132 | 403aa | ENSP00000380643.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMK8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000536957.1 | PXN-004 | 4112 | 589aa | ENSP00000443887.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ78 F8W0G0 F8W0K8 F8W1E0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000458477.2 | PXN-003 | 3807 | 424aa | ENSP00000395536.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44998 | F8W0G0 F8W0K8 F8W1E0 P49023 | NM_025157.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000228307.7 | PXN-001 | 3785 | 591aa | ENSP00000228307.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44997 | F8W0G0 F8W0K8 F8W1E0 P49023 | NM_001080855.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000424649.2 | PXN-002 | 3683 | 557aa | ENSP00000391283.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44996 | F8W0G0 F8W0K8 F8W1E0 P49023 | NM_002859.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000543331.1 | PXN-009 | 957 | 176aa | ENSP00000443745.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H836 F8W0G0 F8W0K8 F8W1E0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546532.1 | PXN-013 | 729 | 37aa | ENSP00000447180.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W0G0 F8W0K8 F8W1E0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548912.1 | PXN-012 | 655 | 36aa | ENSP00000446607.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W0G0 F8W1E0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552550.1 | PXN-014 | 588 | 31aa | ENSP00000446650.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W1E0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550795.1 | PXN-015 | 513 | 171aa | ENSP00000449198.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000547983.1 | PXN-017 | 1004 | 91aa | ENSP00000446893.1 | Nonsense mediated decay | F8VZ39 | - | - | |
| ENST00000538144.1 | PXN-006 | 1805 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000551327.1 | PXN-021 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547772.1 | PXN-016 | 584 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547746.1 | PXN-018 | 579 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000540221.1 | PXN-010 | 550 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000550205.1 | PXN-020 | 547 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000440827.3 | PXN-011 | 516 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000323871.5 | PXN-005 | 5457 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
