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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SUPT4H1 ENSG00000213246

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Description

suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467]

Gene Synonyms

SPT4, SPT4H, SUPT4H

Location

Chromosome 17: 56,422,539-56,430,454 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225504.3	SUPT4H1-001	1489	117aa	ENSP00000225504.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11606	D3DTZ5 J3QR04 P63272	NM_003168.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000577396.1	SUPT4H1-002	1643	76aa	ENSP00000462100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DTZ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581540.1	SUPT4H1-005	668	108aa	ENSP00000464618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DTZ5 J3QSB9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000580947.1	SUPT4H1-006	574	117aa	ENSP00000462670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11606	D3DTZ5 J3QR04 P63272	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581166.1	SUPT4H1-003	1398	59aa	ENSP00000463979.1	Nonsense mediated decay		J3QR04	-	-
ENST00000579289.1	SUPT4H1-004	318	42aa	ENSP00000462602.1	Nonsense mediated decay		J3KSQ6	-	-
ENST00000581204.1	SUPT4H1-007	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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