Human (GRCh37.p13)
Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:HGNC Symbol;Acc:9083]

Gene Synonyms

LH3

Location

Chromosome 7: 100,849,258-100,861,701 reverse strand.

GRCh37:CM000669.1

About this gene

This gene has 16 transcripts (splice variants), 5 paralogues and is associated with 4 phenotypes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000223127.3PLOD3-0012920738aa
 
Protein coding
CCDS5715C9JIX5 O60568 NM_001084.4Ensembl CanonicalGENCODE Basic
ENST00000454310.1PLOD3-0171098264aa
 
Protein coding
--CDS 5' incomplete
ENST00000421736.1PLOD3-009809270aa
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000456079.1PLOD3-00556375aa
 
Protein coding
C9JIX5 -CDS 3' incomplete
ENST00000414785.1PLOD3-007539171aa
 
Protein coding
C9JU11 -CDS 3' incomplete
ENST00000424135.1PLOD3-008565125aa
 
Nonsense mediated decay
H7C2A8 -CDS 5' incomplete
ENST00000440925.1PLOD3-01353666aa
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000478082.1PLOD3-0021585No protein
 
Retained intron
---
ENST00000460475.1PLOD3-011746No protein
 
Retained intron
---
ENST00000487563.1PLOD3-016712No protein
 
Retained intron
---
ENST00000478264.1PLOD3-010663No protein
 
Retained intron
---
ENST00000466881.1PLOD3-014661No protein
 
Retained intron
---
ENST00000460132.1PLOD3-015578No protein
 
Retained intron
---
ENST00000481461.1PLOD3-006564No protein
 
Retained intron
---
ENST00000489927.1PLOD3-004562No protein
 
Retained intron
---
ENST00000463479.1PLOD3-012505No protein
 
Retained intron
---
Name

PLOD3 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: O60568

CCDS

This gene is a member of the Human CCDS set: CCDS5715.1

Ensembl version

ENSG00000106397.7

Other assemblies

This gene maps to 101,205,977-101,218,420 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000157111 (version 3)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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