Description
plasminogen activator, tissue [Source:HGNC Symbol;Acc:9051]
Gene Synonyms
T-PA, TPA
Location
Chromosome 8: 42,032,236-42,065,242 reverse strand.
GRCh37:CM000670.1
About this gene
This gene has 13 transcripts (splice variants), 8 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000220809.4 | PLAT-001 | 2706 | 562aa | ENSP00000220809.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6126 | E5RGA1 E5RHG4 P00750 Q6LBF5 | NM_000930.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000270189.6 | PLAT-201 | 2665 | 293aa | ENSP00000270189.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGA1 E5RHG4 K4DI88 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000429089.2 | PLAT-003 | 2599 | 562aa | ENSP00000392045.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6126 | E5RGA1 E5RHG4 P00750 Q6LBF5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000352041.3 | PLAT-002 | 2516 | 516aa | ENSP00000270188.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6127 | P00750 Q6LBF5 | NM_033011.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000519510.1 | PLAT-005 | 2030 | 499aa | ENSP00000428886.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ESF4 Q6LBF5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000429710.2 | PLAT-006 | 1655 | 436aa | ENSP00000407861.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DNJ1 Q6LBF5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000524009.1 | PLAT-004 | 1613 | 473aa | ENSP00000429401.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DN26 Q6LBF5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000520523.1 | PLAT-012 | 670 | 178aa | ENSP00000428797.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGA1 E5RHG4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521694.1 | PLAT-011 | 549 | 157aa | ENSP00000429801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHG4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521042.1 | PLAT-008 | 604 | 96aa | ENSP00000429542.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000521647.1 | PLAT-013 | 3462 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524261.1 | PLAT-009 | 584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000522812.1 | PLAT-010 | 571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
