Description
exostosin-like glycosyltransferase 3 [Source:HGNC Symbol;Acc:3518]
Gene Synonyms
BOTV, EXTL1L, EXTR1, KIAA0519, REGR, RPR, botv
Location
Chromosome 8: 28,457,986-28,613,116 forward strand.
GRCh37:CM000670.1
About this gene
This gene has 14 transcripts (splice variants), 4 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000220562.4 | EXTL3-001 | 6483 | 919aa | ENSP00000220562.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6070 | B4DG91 E5RIV6 O43909 | NM_001440.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000523149.1 | EXTL3-002 | 1779 | 535aa | ENSP00000428691.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DG91 E5RIV6 E7ET85 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000521473.1 | EXTL3-014 | 601 | 201aa | ENSP00000429627.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000517738.1 | EXTL3-012 | 529 | 118aa | ENSP00000430652.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RIV6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521532.1 | EXTL3-009 | 517 | 137aa | ENSP00000431013.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RK02 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000522698.1 | EXTL3-011 | 565 | 75aa | ENSP00000428352.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000519886.1 | EXTL3-010 | 803 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000518223.1 | EXTL3-008 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000522725.1 | EXTL3-004 | 548 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000520679.1 | EXTL3-013 | 546 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000520940.1 | EXTL3-005 | 542 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000454906.2 | EXTL3-006 | 539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000519288.1 | EXTL3-003 | 474 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000523271.1 | EXTL3-007 | 8257 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
