Description
U6 snRNA biogenesis 1 [Source:HGNC Symbol;Acc:25792]
Gene Synonyms
C16orf57, FLJ13154, HVSL1, Mpn1, PN, hUsb1
Location
Chromosome 16: 58,033,450-58,055,522 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 15 transcripts (splice variants) and is associated with 5 phenotypes.
Transcripts
Show/hide columns (1 hidden)
- Transcript ID
- Name
- bp
- Protein
- Translation ID
- Biotype
- CCDS
- UniProt Match
- RefSeq
- Flags
| Transcript ID | Name | bp | Protein | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| ENST00000219281.3 | USB1-001 | 2282 | 265aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10791 | B4DDJ8 H3BNM8 Q9BQ65 | NM_024598.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000563149.1 | USB1-003 | 1751 | 163aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BN52 | NM_001204911.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000423271.3 | USB1-004 | 1217 | 186aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55997 | Q9BQ65 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000539737.2 | USB1-002 | 1212 | 247aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55998 | Q9BQ65 | NM_001195302.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000561743.1 | USB1-012 | 1135 | 214aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDJ8 H3BNM8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000561568.1 | USB1-014 | 671 | 182aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BTT8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564387.1 | USB1-015 | 558 | 95aa | Nonsense mediated decay | H3BTS1 | - | - | |
| ENST00000565662.1 | USB1-017 | 719 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000569252.1 | USB1-016 | 573 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000562534.1 | USB1-018 | 562 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000568848.1 | USB1-009 | 548 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000563207.1 | USB1-013 | 464 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000566082.1 | USB1-005 | 3888 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000565151.1 | USB1-011 | 886 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000566292.1 | USB1-010 | 575 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
Showing 1 to 15 of 15 entries
