Description
phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:HGNC Symbol;Acc:8725]
Gene Synonyms
PEPCK, PEPCK-M, PEPCK2
Location
Chromosome 14: 24,563,262-24,579,807 forward strand.
GRCh37:CM000676.1
About this gene
This gene has 16 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000216780.4 | PCK2-002 | 2357 | 640aa | ENSP00000216780.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9609 | B4DW73 H0YMU6 H0YNG4 Q16822 | NM_004563.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545054.2 | PCK2-008 | 2505 | 506aa | ENSP00000441826.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DW73 H0YMU6 H0YNG4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000558096.1 | PCK2-007 | 2433 | 474aa | ENSP00000453656.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YML5 H0YMU6 H0YNG4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000561286.1 | PCK2-005 | 2012 | 506aa | ENSP00000454011.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DW73 H0YMU6 H0YNG4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000396973.4 | PCK2-001 | 1830 | 441aa | ENSP00000380171.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41928 | H0YMU6 H0YNG4 Q16822 | NM_001018073.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000559250.1 | PCK2-003 | 1804 | 509aa | ENSP00000453444.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YM31 H0YMU6 H0YNG4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000560736.1 | PCK2-012 | 897 | 113aa | ENSP00000453998.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YMU6 H0YNG4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559837.1 | PCK2-013 | 756 | 107aa | ENSP00000453751.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YMU6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559171.1 | PCK2-009 | 508 | 109aa | ENSP00000453791.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000559503.1 | PCK2-011 | 826 | 122aa | ENSP00000453528.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000560106.1 | PCK2-014 | 782 | 42aa | ENSP00000454020.1 | Nonsense mediated decay | H0YNH9 | - | - | |
| ENST00000559584.1 | PCK2-015 | 666 | 62aa | ENSP00000452748.1 | Nonsense mediated decay | H0YKC4 | - | - | |
| ENST00000560657.1 | PCK2-016 | 559 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000558674.1 | PCK2-006 | 2189 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000561050.1 | PCK2-004 | 1856 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557969.1 | PCK2-010 | 525 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
