Description
APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:HGNC Symbol;Acc:587]
Gene Synonyms
APE, APE-1, APE1, APEN, APEX, APX, HAP1, REF-1, REF1
Location
Chromosome 14: 20,923,350-20,925,927 forward strand.
GRCh37:CM000676.1
About this gene
This gene has 20 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000216714.3 | APEX1-001 | 1484 | 318aa | ENSP00000216714.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9550 | G3V3C7 G3V3M6 G3V5D9 P27695 Q5TZP7 | NM_001641.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000555414.1 | APEX1-002 | 1433 | 318aa | ENSP00000451979.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9550 | G3V3C7 G3V3M6 G3V5D9 P27695 Q5TZP7 | NM_080649.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000398030.4 | APEX1-008 | 1387 | 318aa | ENSP00000381111.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9550 | G3V3C7 G3V3M6 G3V5D9 P27695 Q5TZP7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000555839.1 | APEX1-016 | 952 | 242aa | ENSP00000452460.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5D9 G3V5Q1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553681.1 | APEX1-009 | 899 | 263aa | ENSP00000451327.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3C7 G3V3M6 G3V5D9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557054.1 | APEX1-006 | 888 | 14aa | ENSP00000452212.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000556054.1 | APEX1-017 | 773 | 174aa | ENSP00000451170.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3C7 G3V5D9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557150.1 | APEX1-021 | 740 | 162aa | ENSP00000452418.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3Y6 G3V5M0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557344.1 | APEX1-013 | 671 | 146aa | ENSP00000452137.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5D9 P27695 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557592.1 | APEX1-018 | 640 | 172aa | ENSP00000451060.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V359 G3V3Y6 G3V5M0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557181.1 | APEX1-014 | 566 | 107aa | ENSP00000452304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5D9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000438886.1 | APEX1-003 | 451 | 150aa | ENSP00000416414.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000553368.1 | APEX1-019 | 304 | 41aa | ENSP00000451491.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3Y6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554325.1 | APEX1-015 | 568 | 49aa | ENSP00000450604.1 | Nonsense mediated decay | G3V2D9 | - | - | |
| ENST00000557365.1 | APEX1-020 | 831 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000554813.1 | APEX1-010 | 654 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000556296.1 | APEX1-011 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000557159.1 | APEX1-005 | 1803 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553555.1 | APEX1-007 | 1603 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000555306.1 | APEX1-012 | 898 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
