Gene: SLC22A17 ENSG00000092096

Description

solute carrier family 22, member 17 [Source:HGNC Symbol;Acc:23095]

Gene Synonyms

24p3R, BOCT, BOIT, NGALR, NGALR2, NGALR3, hBOIT

Location

Chromosome 14: 23,815,515-23,822,121 reverse strand.

GRCh37:CM000676.1

About this gene

This gene has 9 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397267.1	SLC22A17-201	2398	538aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9593	Q8WUG5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000354772.3	SLC22A17-001	2409	520aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9594	Q8WUG5	NM_016609.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000206544.8	SLC22A17-003	2284	538aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9593	Q8WUG5	NM_020372.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397260.3	SLC22A17-005	2245	409aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KVA1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000474057.1	SLC22A17-002	2060	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474774.1	SLC22A17-006	387	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473917.1	SLC22A17-004	1746	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557699.1	SLC22A17-008	1533	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556803.1	SLC22A17-007	954	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

SLC22A17 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q8WUG5

CCDS

This gene is a member of the Human CCDS set: CCDS9593.1, CCDS9594.2

Ensembl version

ENSG00000092096.10

Other assemblies

This gene maps to 23,346,306-23,352,912 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000028740 (version 4)

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Gene: SLC22A17 ENSG00000092096

Summary