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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FAP ENSG00000078098

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Description

fibroblast activation protein, alpha [Source:HGNC Symbol;Acc:3590]

Gene Synonyms

DPPIV, FAPA

Location

Chromosome 2: 163,027,194-163,101,661 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 13 transcripts (splice variants) and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000188790.4	FAP-001	2780	760aa	ENSP00000188790.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33311	C9J131 Q12884	NM_004460.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000443424.1	FAP-015	2598	735aa	ENSP00000411391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DLR2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447386.1	FAP-007	578	155aa	ENSP00000400137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J131	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422436.1	FAP-004	1537	25aa	ENSP00000417028.1	Nonsense mediated decay		H7C4D9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450031.2	FAP-012	706	121aa	ENSP00000407404.2	Nonsense mediated decay		F8WF29	-	-
ENST00000462608.1	FAP-014	697	47aa	ENSP00000441940.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493182.1	FAP-006	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480044.1	FAP-005	2411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480838.1	FAP-003	1366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465424.1	FAP-008	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497414.1	FAP-009	698	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465088.1	FAP-011	488	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461506.1	FAP-010	452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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