Description
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:HGNC Symbol;Acc:10860]
Gene Synonyms
SIAT1, ST6GalI, ST6N
Location
Chromosome 3: 186,648,274-186,796,341 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 22 transcripts (splice variants) and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000169298.3 | ST6GAL1-001 | 4645 | 406aa | ENSP00000169298.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3285 | B2R513 C9IYS8 C9J6X5 C9JAT4 C9JFM4 C9JH16 C9JI90 C9JKG0 C9JPG6 C9JR47 C9JTR0 C9JVK7 C9K0R8 P15907 | NM_173216.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000448044.1 | ST6GAL1-002 | 4302 | 406aa | ENSP00000389337.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3285 | B2R513 C9IYS8 C9J6X5 C9JAT4 C9JFM4 C9JH16 C9JI90 C9JKG0 C9JPG6 C9JR47 C9JTR0 C9JVK7 C9K0R8 P15907 | NM_003032.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000457772.2 | ST6GAL1-201 | 3947 | 175aa | ENSP00000412221.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46973 | B2R513 C9JAT4 C9JH16 C9JVK7 | NM_173217.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000448408.1 | ST6GAL1-013 | 1005 | 98aa | ENSP00000390793.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JFM4 C9JI90 C9JKG0 C9JPG6 C9JR47 C9JTR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000417392.1 | ST6GAL1-011 | 707 | 113aa | ENSP00000407631.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JFM4 C9JI90 C9JKG0 C9JPG6 C9JR47 C9JTR0 C9K0R8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000438590.1 | ST6GAL1-012 | 608 | 97aa | ENSP00000416163.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JI90 C9JKG0 C9JPG6 C9JR47 C9JTR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000423451.1 | ST6GAL1-015 | 602 | 127aa | ENSP00000411518.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9J6X5 C9JFM4 C9JI90 C9JKG0 C9JPG6 C9JR47 C9JTR0 C9K0R8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000455441.1 | ST6GAL1-006 | 596 | 21aa | ENSP00000397273.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAT4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000446170.1 | ST6GAL1-016 | 588 | 91aa | ENSP00000388789.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JKG0 C9JPG6 C9JR47 C9JTR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000416235.1 | ST6GAL1-018 | 577 | 74aa | ENSP00000414504.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JKG0 C9JPG6 C9JTR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000442023.1 | ST6GAL1-020 | 570 | 115aa | ENSP00000403063.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAT4 C9JH16 C9JVK7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440338.1 | ST6GAL1-017 | 568 | 45aa | ENSP00000388928.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JPG6 C9JTR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000427315.1 | ST6GAL1-007 | 544 | 52aa | ENSP00000412821.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAT4 C9JVK7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000458216.1 | ST6GAL1-010 | 507 | 25aa | ENSP00000400547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430309.1 | ST6GAL1-009 | 504 | 42aa | ENSP00000399525.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYS8 C9JTR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000448449.1 | ST6GAL1-019 | 1055 | 178aa | ENSP00000415886.1 | Nonsense mediated decay | H7C472 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000487031.1 | ST6GAL1-005 | 592 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463542.1 | ST6GAL1-004 | 516 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000485105.1 | ST6GAL1-014 | 462 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470633.1 | ST6GAL1-003 | 4893 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468614.1 | ST6GAL1-008 | 642 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464827.1 | ST6GAL1-021 | 494 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
