Description
CD74 molecule, major histocompatibility complex, class II invariant chain [Source:HGNC Symbol;Acc:1697]
Gene Synonyms
DHLAG, HLADG, II, Ia-GAMMA
Location
Chromosome 5: 149,781,200-149,792,492 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 12 transcripts (splice variants) and is associated with 46 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000009530.7 | CD74-003 | 981 | 296aa | ENSP00000009530.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47309 | O19685 O78208 P04233 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000518797.1 | CD74-004 | 1727 | 316aa | ENSP00000430614.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O78208 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000353334.6 | CD74-001 | 1449 | 232aa | ENSP00000230685.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47308 | O19685 P04233 | NM_004355.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000377795.3 | CD74-002 | 1138 | 160aa | ENSP00000367026.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34276 | O19685 P04233 | NM_001025158.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000524315.1 | CD74-011 | 584 | 152aa | ENSP00000429024.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ESL3 O19685 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000523208.1 | CD74-008 | 767 | 145aa | ENSP00000430654.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000522246.1 | CD74-009 | 563 | 122aa | ENSP00000429641.1 | Nonsense mediated decay | E7EQJ3 O19685 | - | - | |
| ENST00000523813.1 | CD74-007 | 546 | 52aa | ENSP00000429478.1 | Nonsense mediated decay | E7ER71 O19685 | - | - | |
| ENST00000517791.1 | CD74-005 | 1015 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000517752.1 | CD74-013 | 816 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000523836.1 | CD74-006 | 724 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000522153.1 | CD74-010 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
