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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPAP3 ENSG00000005175

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Description

RNA polymerase II associated protein 3 [Source:HGNC Symbol;Acc:26151]

Gene Synonyms

FLJ21908, spag

Location

Chromosome 12: 48,057,070-48,099,844 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 7 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000005386.3	RPAP3-001	2332	665aa	ENSP00000005386.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8753	Q9H6T3	NM_024604.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380650.4	RPAP3-003	2149	631aa	ENSP00000370024.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53783	Q9H6T3	NM_001146075.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432584.3	RPAP3-002	2133	506aa	ENSP00000401823.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53782	Q9H6T3	NM_001146076.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548211.1	RPAP3-007	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547706.1	RPAP3-006	420	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551293.1	RPAP3-004	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548296.1	RPAP3-005	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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