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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPATS1 ENSG00000249481

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Description

spermatogenesis associated, serine-rich 1 [Source:HGNC Symbol;Acc:22957]

Gene Synonyms

DDIP, FLJ25442, SPATA8, SRSP1

Location

Chromosome 6: 44,310,397-44,344,904 forward strand.

GRCh37:CM000668.1

About this gene

This gene has 4 transcripts (splice variants) and 90 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288390.2	SPATS1-001	1354	300aa	ENSP00000424400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4911	H0Y9A9 Q496A3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000323108.8	SPATS1-201	1107	300aa	ENSP00000437552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4911	H0Y9A9 Q496A3	NM_145026.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515220.1	SPATS1-003	455	118aa	ENSP00000423654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9A9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506468.1	SPATS1-002	1254	71aa	ENSP00000424823.1	Nonsense mediated decay		D6RF91	-	-

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Summary

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