Description
pregnancy specific beta-1-glycoprotein 4 [Source:HGNC Symbol;Acc:9521]
Gene Synonyms
CGM4, PSG9
Location
Chromosome 19: 43,696,854-43,711,451 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 17 transcripts (splice variants), 582 orthologues and 24 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000405312.3 | PSG4-001 | 2168 | 419aa | ENSP00000384770.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46093 | M0QYU2 Q00888 | NM_002780.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000433626.2 | PSG4-201 | 1774 | 326aa | ENSP00000387864.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS62695 | E7EX79 | NM_001276495.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000244295.9 | PSG4-003 | 1629 | 326aa | ENSP00000244295.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33039 | M0QYU2 Q00888 | NM_213633.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000451895.1 | PSG4-004 | 996 | 252aa | ENSP00000388134.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JWP2 M0QYU2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000596907.1 | PSG4-009 | 976 | 292aa | ENSP00000471124.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0R0B3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000597374.1 | PSG4-015 | 828 | 258aa | ENSP00000472423.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000599746.1 | PSG4-010 | 731 | 244aa | ENSP00000469547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000599371.1 | PSG4-008 | 648 | 96aa | ENSP00000472818.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000599391.1 | PSG4-011 | 555 | 180aa | ENSP00000472885.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0R2Y7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000600572.1 | PSG4-006 | 526 | 78aa | ENSP00000470073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYU2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000595949.1 | PSG4-013 | 1034 | 40aa | ENSP00000472243.1 | Nonsense mediated decay | M0R215 | - | - | |
| ENST00000601041.1 | PSG4-012 | 763 | 52aa | ENSP00000470992.1 | Nonsense mediated decay | M0R046 | - | - | |
| ENST00000597912.1 | PSG4-016 | 2294 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490769.1 | PSG4-002 | 1198 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000597349.1 | PSG4-014 | 795 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495316.2 | PSG4-005 | 698 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000596199.1 | PSG4-007 | 527 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
