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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF542 ENSG00000240225

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Description

zinc finger protein 542 [Source:HGNC Symbol;Acc:25393]

Gene Synonyms

DKFZp686B2197

Location

Chromosome 19: 56,879,468-56,891,197 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq	Flags
ENST00000490123.1	ZNF542-001	3440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000495307.1	ZNF542-004	3393	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000467807.1	ZNF542-002	3209	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000488113.1	ZNF542-003	1989	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000468396.1	ZNF542-006	980	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000589844.1	ZNF542-008	945	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000587208.1	ZNF542-009	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000462524.1	ZNF542-007	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000595222.1	ZNF542-013	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
ENST00000587341.1	ZNF542-010	1076	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENST00000596094.1	ZNF542-012	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENST00000482727.1	ZNF542-005	1305	No protein	-	Transcribed unprocessed pseudogene		-	-

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Summary

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