Description
secretory carrier membrane protein 4 [Source:HGNC Symbol;Acc:30385]
Gene Synonyms
FLJ33847, SCAMP-4
Location
Chromosome 19: 1,905,213-1,926,016 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 12 transcripts (splice variants), 198 orthologues and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000316097.8 | SCAMP4-002 | 2690 | 229aa | ENSP00000316007.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45903 | C9JWM2 K7EJJ4 Q969E2 | NM_079834.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000409472.1 | SCAMP4-003 | 2393 | 195aa | ENSP00000386865.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJJ4 Q969E2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000411971.1 | SCAMP4-008 | 783 | 123aa | ENSP00000388185.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JWM2 K7EJJ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000590266.1 | SCAMP4-009 | 535 | 45aa | ENSP00000465199.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJJ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000414057.2 | SCAMP4-011 | 609 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489554.1 | SCAMP4-007 | 573 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000460767.1 | SCAMP4-006 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000588907.1 | SCAMP4-013 | 547 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000585335.1 | SCAMP4-014 | 432 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000472442.1 | SCAMP4-005 | 2954 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588555.1 | SCAMP4-012 | 1785 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000452128.2 | SCAMP4-010 | 718 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
