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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CKLF ENSG00000217555

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Description

chemokine-like factor [Source:HGNC Symbol;Acc:13253]

Gene Synonyms

C32, CKLF1, CKLF2, CKLF3, CKLF4, HSPC224, UCK-1

Location

Chromosome 16: 66,586,466-66,600,154 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 8 transcripts (splice variants), 147 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264001.4	CKLF-001	669	152aa	ENSP00000264001.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10807	Q9UBR5	NM_016951.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417030.2	CKLF-005	628	113aa	ENSP00000416678.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45502	Q9UBR5	NM_001040138.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000345436.4	CKLF-003	571	120aa	ENSP00000290771.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10809	Q9UBR5	NM_181641.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000351137.4	CKLF-002	508	99aa	ENSP00000264003.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10808	Q5BJH6 Q9UBR5	NM_181640.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000362093.4	CKLF-004	412	67aa	ENSP00000355417.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10806	Q9UBR5	NM_016326.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534692.1	CKLF-006	546	33aa	ENSP00000431270.1	Nonsense mediated decay		E9PLU7	-	-
ENST00000563092.1	CKLF-009	365	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526149.1	CKLF-007	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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