Description
tumor necrosis factor receptor superfamily, member 25 [Source:HGNC Symbol;Acc:11910]
Gene Synonyms
APO-3, APO3, DDR3, DR3, LARD, TNFRSF12, TR3, TRAMP, WSL, WSL-1, WSL-LR, WSL1
Location
Chromosome 1: 6,521,211-6,526,255 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 20 transcripts (splice variants), 451 orthologues and 21 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000377782.3 | TNFRSF25-004 | 1632 | 426aa | ENSP00000367013.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS72 | B3KSV7 Q93038 | NM_148965.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356876.3 | TNFRSF25-001 | 1625 | 417aa | ENSP00000349341.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS71 | B3KSV7 Q93038 | NM_148967.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000351959.5 | TNFRSF25-013 | 1441 | 380aa | ENSP00000337713.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS73 | B3KSV7 Q93038 | NM_148966.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000348333.3 | TNFRSF25-016 | 1119 | 372aa | ENSP00000314451.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS74 | B3KSV7 Q93038 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000481401.1 | TNFRSF25-012 | 764 | 45aa | ENSP00000465381.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJY9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000351748.3 | TNFRSF25-015 | 705 | 234aa | ENSP00000326762.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS75 | B3KSV7 Q93038 | NM_148970.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000485036.1 | TNFRSF25-002 | 1726 | 277aa | ENSP00000431554.1 | Nonsense mediated decay | Q93038 | - | - | |
| ENST00000480393.1 | TNFRSF25-003 | 1706 | 253aa | ENSP00000434129.1 | Nonsense mediated decay | Q93038 | - | - | |
| ENST00000414040.2 | TNFRSF25-009 | 1198 | 218aa | ENSP00000404274.2 | Nonsense mediated decay | Q93038 | - | - | |
| ENST00000510563.1 | TNFRSF25-019 | 1087 | 181aa | ENSP00000424071.1 | Nonsense mediated decay | A5LIN1 Q93038 | - | - | |
| ENST00000502588.1 | TNFRSF25-017 | 952 | 136aa | ENSP00000423121.1 | Nonsense mediated decay | Q93038 | - | - | |
| ENST00000502730.1 | TNFRSF25-018 | 838 | 126aa | ENSP00000421976.1 | Nonsense mediated decay | Q93038 | - | - | |
| ENST00000461703.2 | TNFRSF25-014 | 567 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000475730.1 | TNFRSF25-011 | 477 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513135.1 | TNFRSF25-020 | 3483 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473343.1 | TNFRSF25-007 | 1591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000453260.2 | TNFRSF25-010 | 984 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469691.1 | TNFRSF25-008 | 801 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000453341.1 | TNFRSF25-006 | 798 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515145.1 | TNFRSF25-021 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
