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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZBED1 ENSG00000214717

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Description

zinc finger, BED-type containing 1 [Source:HGNC Symbol;Acc:447]

Gene Synonyms

ALTE, DREF, KIAA0785, TRAMP, hDREF

Location

Chromosome X: 2,404,455-2,419,008 reverse strand.

GRCh37:CM000685.1

This gene is mapped to the following HAP/PARs:

Y : 2,354,455-2,369,008

About this gene

This gene has 5 transcripts (splice variants), 127 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381223.4	ZBED1-201	4510	694aa	ENSP00000370621.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14118	C9JXP4 O96006	NM_004729.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381222.2	ZBED1-001	4485	694aa	ENSP00000370620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14118	C9JXP4 O96006	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381218.3	ZBED1-002	2832	694aa	ENSP00000370616.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14118	C9JXP4 O96006	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461691.1	ZBED1-003	947	271aa	ENSP00000419148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JXP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515319.1	ZBED1-004	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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