Description
copine I [Source:HGNC Symbol;Acc:2314]
Gene Synonyms
COPN1, CPN1
Location
Chromosome 20: 34,213,953-34,252,878 reverse strand.
GRCh37:CM000682.1
About this gene
This gene has 31 transcripts (splice variants), 177 orthologues and 8 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000317677.5 | CPNE1-005 | 1961 | 542aa | ENSP00000317257.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46595 | B0QZ18 Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 | NM_003915.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000317619.3 | CPNE1-201 | 2204 | 537aa | ENSP00000326126.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13260 | Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 Q99829 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000352393.4 | CPNE1-004 | 2147 | 537aa | ENSP00000336945.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13260 | Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 Q99829 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397446.1 | CPNE1-204 | 2077 | 537aa | ENSP00000380588.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13260 | Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 Q99829 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397445.1 | CPNE1-203 | 2061 | 537aa | ENSP00000380587.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13260 | Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 Q99829 | NM_152928.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397443.1 | CPNE1-202 | 1976 | 537aa | ENSP00000380585.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13260 | Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 Q99829 | NM_152926.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000437340.1 | CPNE1-033 | 1755 | 533aa | ENSP00000415597.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F2Z2V0 Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000397442.1 | CPNE1-032 | 1695 | 481aa | ENSP00000380584.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVH9 Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000430570.1 | CPNE1-013 | 1332 | 386aa | ENSP00000390626.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q59EI4 Q5JX45 Q5JX52 Q5JX53 Q5JX57 Q5JX61 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000414664.1 | CPNE1-007 | 1070 | 304aa | ENSP00000404355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412056.1 | CPNE1-014 | 998 | 305aa | ENSP00000416962.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX52 Q5JX53 Q5JX57 Q5JX61 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000434795.1 | CPNE1-016 | 831 | 201aa | ENSP00000409794.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000437100.1 | CPNE1-010 | 826 | 152aa | ENSP00000391483.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX54 Q5JX55 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420363.1 | CPNE1-008 | 821 | 209aa | ENSP00000401915.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000439806.2 | CPNE1-009 | 748 | 231aa | ENSP00000387434.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440240.1 | CPNE1-012 | 746 | 174aa | ENSP00000397638.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX54 Q5JX55 Q5JX56 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000416778.1 | CPNE1-017 | 744 | 213aa | ENSP00000389662.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX57 Q5JX61 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000415920.1 | CPNE1-015 | 731 | 208aa | ENSP00000396069.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000414711.1 | CPNE1-011 | 673 | 136aa | ENSP00000409955.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000458038.1 | CPNE1-020 | 596 | 137aa | ENSP00000390141.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 Q5JX57 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000435747.1 | CPNE1-021 | 400 | 66aa | ENSP00000412806.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JX53 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000401607.2 | CPNE1-028 | 1795 | 427aa | ENSP00000386067.2 | Nonsense mediated decay | E7ENH5 Q5JX44 Q5JX53 Q5JX54 Q5JX55 Q5JX56 Q5JX58 Q5JX59 Q5JX60 | - | - | |
| ENST00000439669.1 | CPNE1-025 | 784 | 138aa | ENSP00000409305.1 | Nonsense mediated decay | E7EV27 Q5JX53 | - | - | |
| ENST00000475146.1 | CPNE1-024 | 627 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462352.1 | CPNE1-018 | 625 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498814.1 | CPNE1-019 | 550 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498056.1 | CPNE1-003 | 362 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000483359.1 | CPNE1-027 | 1975 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483495.1 | CPNE1-001 | 1853 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473373.1 | CPNE1-022 | 821 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486021.1 | CPNE1-026 | 506 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
